Molecular Identification and Karyological Analysis of a Rampant Aspen Populus tremula L. (Salicaceae) Clone.
Identifieur interne : 001301 ( Main/Exploration ); précédent : 001300; suivant : 001302Molecular Identification and Karyological Analysis of a Rampant Aspen Populus tremula L. (Salicaceae) Clone.
Auteurs : Dmitry V. Politov [Russie] ; Yuri S. Belokon [Russie] ; Anna V. Shatokhina [Russie] ; Maryana M. Belokon [Russie] ; Nail A. Khanov [Russie] ; Elena A. Mudrik [Russie] ; Tatyana A. Polyakova [Russie] ; Anna B. Azarova [Russie] ; Konstantin A. Shestibratov [Russie]Source :
- International journal of plant genomics [ 1687-5370 ] ; 2017.
Abstract
A rampant highly heterozygous aspen (Populus tremula L.) clone "Meshabash" has been revealed in course of population genetic diversity analysis in a native stand in the Republic of Tatarstan, Russia. Here we report the results of karyological analysis showing that this highly vigorous clone is diploid (2n = 38) while typically triploid aspen demonstrates increased growth rate and resistance to aspen trunk rot caused by fungus Phellinus tremulae. By means of DNA identification of a series of model trees using 14 SSR loci we outlined the area occupied by this clone (at least 1.94 ha) and demonstrated that its ramets constitute 40 out of 48 genotyped trunks on the plot with the maximal distance between ramets 254 m. Since aspen is able to regenerate after cutting or die-off of maternal tree by root suckers at a distance up to 20-35 m this assumed that current stand appeared as a result of such spreading from an ortet tree during at least 5 generations. Trunk rot damage in the wood of model trees indicated low influence of this pathogen on viability and performance of the studied clone that can be associated with its extreme heterozygosity level (0.926) exceeding all the studied trees in this research plot and in three other control samples.
DOI: 10.1155/2017/5636314
PubMed: 28512468
PubMed Central: PMC5420415
Affiliations:
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(Salicaceae) Clone.</title><author><name sortKey="Politov, Dmitry V" sort="Politov, Dmitry V" uniqKey="Politov D" first="Dmitry V" last="Politov">Dmitry V. Politov</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991</wicri:regionArea><placeName><settlement type="city">Moscou</settlement><region>District fédéral central</region></placeName></affiliation></author><author><name sortKey="Belokon, Yuri S" sort="Belokon, Yuri S" uniqKey="Belokon Y" first="Yuri S" last="Belokon">Yuri S. Belokon</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991</wicri:regionArea><placeName><settlement type="city">Moscou</settlement><region>District fédéral central</region></placeName></affiliation></author><author><name sortKey="Shatokhina, Anna V" sort="Shatokhina, Anna V" uniqKey="Shatokhina A" first="Anna V" last="Shatokhina">Anna V. Shatokhina</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991</wicri:regionArea><placeName><settlement type="city">Moscou</settlement><region>District fédéral central</region></placeName></affiliation></author><author><name sortKey="Belokon, Maryana M" sort="Belokon, Maryana M" uniqKey="Belokon M" first="Maryana M" last="Belokon">Maryana M. Belokon</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991</wicri:regionArea><placeName><settlement type="city">Moscou</settlement><region>District fédéral central</region></placeName></affiliation></author><author><name sortKey="Khanov, Nail A" sort="Khanov, Nail A" uniqKey="Khanov N" first="Nail A" last="Khanov">Nail A. Khanov</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Biotechnologies, Sabinsky Training Experimental Forestry, Leskhoz, Republic of Tatarstan 422062, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Laboratory of Biotechnologies, Sabinsky Training Experimental Forestry, Leskhoz, Republic of Tatarstan 422062</wicri:regionArea><wicri:noRegion>Republic of Tatarstan 422062</wicri:noRegion></affiliation></author><author><name sortKey="Mudrik, Elena A" sort="Mudrik, Elena A" uniqKey="Mudrik E" first="Elena A" last="Mudrik">Elena A. Mudrik</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991</wicri:regionArea><placeName><settlement type="city">Moscou</settlement><region>District fédéral central</region></placeName></affiliation></author><author><name sortKey="Polyakova, Tatyana A" sort="Polyakova, Tatyana A" uniqKey="Polyakova T" first="Tatyana A" last="Polyakova">Tatyana A. Polyakova</name><affiliation wicri:level="1"><nlm:affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991</wicri:regionArea><placeName><settlement type="city">Moscou</settlement><region>District fédéral central</region></placeName></affiliation><affiliation wicri:level="1"><nlm:affiliation>Forest Genetics Department, Russian Center for Forest Health, Pushkino 141207, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Forest Genetics Department, Russian Center for Forest Health, Pushkino 141207</wicri:regionArea><wicri:noRegion>Pushkino 141207</wicri:noRegion></affiliation></author><author><name sortKey="Azarova, Anna B" sort="Azarova, Anna B" uniqKey="Azarova A" first="Anna B" last="Azarova">Anna B. Azarova</name><affiliation wicri:level="1"><nlm:affiliation>Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290</wicri:regionArea><wicri:noRegion>Pushchino 142290</wicri:noRegion></affiliation></author><author><name sortKey="Shestibratov, Konstantin A" sort="Shestibratov, Konstantin A" uniqKey="Shestibratov K" first="Konstantin A" last="Shestibratov">Konstantin A. Shestibratov</name><affiliation wicri:level="1"><nlm:affiliation>Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia.</nlm:affiliation><country xml:lang="fr">Russie</country><wicri:regionArea>Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290</wicri:regionArea><wicri:noRegion>Pushchino 142290</wicri:noRegion></affiliation></author></analytic><series><title level="j">International journal of plant genomics</title><idno type="ISSN">1687-5370</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A rampant highly heterozygous aspen (<i>Populus tremula</i> L.) clone <i>"Meshabash"</i> has been revealed in course of population genetic diversity analysis in a native stand in the Republic of Tatarstan, Russia. Here we report the results of karyological analysis showing that this highly vigorous clone is diploid (2<i>n</i> = 38) while typically triploid aspen demonstrates increased growth rate and resistance to aspen trunk rot caused by fungus <i>Phellinus tremulae</i>. By means of DNA identification of a series of model trees using 14 SSR loci we outlined the area occupied by this clone (at least 1.94 ha) and demonstrated that its ramets constitute 40 out of 48 genotyped trunks on the plot with the maximal distance between ramets 254 m. Since aspen is able to regenerate after cutting or die-off of maternal tree by root suckers at a distance up to 20-35 m this assumed that current stand appeared as a result of such spreading from an ortet tree during at least 5 generations. Trunk rot damage in the wood of model trees indicated low influence of this pathogen on viability and performance of the studied clone that can be associated with its extreme heterozygosity level (0.926) exceeding all the studied trees in this research plot and in three other control samples.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">28512468</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">1687-5370</ISSN><JournalIssue CitedMedium="Print"><Volume>2017</Volume><PubDate><Year>2017</Year></PubDate></JournalIssue><Title>International journal of plant genomics</Title><ISOAbbreviation>Int J Plant Genomics</ISOAbbreviation></Journal><ArticleTitle>Molecular Identification and Karyological Analysis of a Rampant Aspen <i>Populus tremula</i> L. (Salicaceae) Clone.</ArticleTitle><Pagination><MedlinePgn>5636314</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1155/2017/5636314</ELocationID><Abstract><AbstractText>A rampant highly heterozygous aspen (<i>Populus tremula</i> L.) clone <i>"Meshabash"</i> has been revealed in course of population genetic diversity analysis in a native stand in the Republic of Tatarstan, Russia. Here we report the results of karyological analysis showing that this highly vigorous clone is diploid (2<i>n</i> = 38) while typically triploid aspen demonstrates increased growth rate and resistance to aspen trunk rot caused by fungus <i>Phellinus tremulae</i>. By means of DNA identification of a series of model trees using 14 SSR loci we outlined the area occupied by this clone (at least 1.94 ha) and demonstrated that its ramets constitute 40 out of 48 genotyped trunks on the plot with the maximal distance between ramets 254 m. Since aspen is able to regenerate after cutting or die-off of maternal tree by root suckers at a distance up to 20-35 m this assumed that current stand appeared as a result of such spreading from an ortet tree during at least 5 generations. Trunk rot damage in the wood of model trees indicated low influence of this pathogen on viability and performance of the studied clone that can be associated with its extreme heterozygosity level (0.926) exceeding all the studied trees in this research plot and in three other control samples.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Politov</LastName><ForeName>Dmitry V</ForeName><Initials>DV</Initials><Identifier Source="ORCID">0000-0003-1569-5565</Identifier><AffiliationInfo><Affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Belokon</LastName><ForeName>Yuri S</ForeName><Initials>YS</Initials><AffiliationInfo><Affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Shatokhina</LastName><ForeName>Anna V</ForeName><Initials>AV</Initials><AffiliationInfo><Affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Belokon</LastName><ForeName>Maryana M</ForeName><Initials>MM</Initials><AffiliationInfo><Affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Khanov</LastName><ForeName>Nail A</ForeName><Initials>NA</Initials><AffiliationInfo><Affiliation>Laboratory of Biotechnologies, Sabinsky Training Experimental Forestry, Leskhoz, Republic of Tatarstan 422062, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Mudrik</LastName><ForeName>Elena A</ForeName><Initials>EA</Initials><AffiliationInfo><Affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Polyakova</LastName><ForeName>Tatyana A</ForeName><Initials>TA</Initials><AffiliationInfo><Affiliation>Laboratory of Population Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119991, Russia.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Forest Genetics Department, Russian Center for Forest Health, Pushkino 141207, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Azarova</LastName><ForeName>Anna B</ForeName><Initials>AB</Initials><AffiliationInfo><Affiliation>Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Shestibratov</LastName><ForeName>Konstantin A</ForeName><Initials>KA</Initials><AffiliationInfo><Affiliation>Forest Biotechnology Group, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Pushchino Branch, Pushchino 142290, Russia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>04</Month><Day>23</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Int J Plant Genomics</MedlineTA><NlmUniqueID>101307648</NlmUniqueID><ISSNLinking>1687-5389</ISSNLinking></MedlineJournalInfo></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>11</Month><Day>18</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2017</Year><Month>02</Month><Day>17</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>02</Month><Day>26</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>5</Month><Day>18</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>5</Month><Day>18</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>5</Month><Day>18</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28512468</ArticleId><ArticleId IdType="doi">10.1155/2017/5636314</ArticleId><ArticleId IdType="pmc">PMC5420415</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Tree Physiol. 1998 Jan;18(1):29-36</Citation><ArticleIdList><ArticleId IdType="pubmed">12651296</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol 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Politov</name></region><name sortKey="Azarova, Anna B" sort="Azarova, Anna B" uniqKey="Azarova A" first="Anna B" last="Azarova">Anna B. Azarova</name><name sortKey="Belokon, Maryana M" sort="Belokon, Maryana M" uniqKey="Belokon M" first="Maryana M" last="Belokon">Maryana M. Belokon</name><name sortKey="Belokon, Yuri S" sort="Belokon, Yuri S" uniqKey="Belokon Y" first="Yuri S" last="Belokon">Yuri S. Belokon</name><name sortKey="Khanov, Nail A" sort="Khanov, Nail A" uniqKey="Khanov N" first="Nail A" last="Khanov">Nail A. Khanov</name><name sortKey="Mudrik, Elena A" sort="Mudrik, Elena A" uniqKey="Mudrik E" first="Elena A" last="Mudrik">Elena A. Mudrik</name><name sortKey="Polyakova, Tatyana A" sort="Polyakova, Tatyana A" uniqKey="Polyakova T" first="Tatyana A" last="Polyakova">Tatyana A. Polyakova</name><name sortKey="Polyakova, Tatyana A" sort="Polyakova, Tatyana A" uniqKey="Polyakova T" first="Tatyana A" last="Polyakova">Tatyana A. Polyakova</name><name sortKey="Shatokhina, Anna V" sort="Shatokhina, Anna V" uniqKey="Shatokhina A" first="Anna V" last="Shatokhina">Anna V. Shatokhina</name><name sortKey="Shestibratov, Konstantin A" sort="Shestibratov, Konstantin A" uniqKey="Shestibratov K" first="Konstantin A" last="Shestibratov">Konstantin A. Shestibratov</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|clé= pubmed:28512468
|texte= Molecular Identification and Karyological Analysis of a Rampant Aspen Populus tremula L. (Salicaceae) Clone.
}}
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HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:28512468" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarV1
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